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rVarBase
SNP Report
Basic Infomation
Name
rs11604369  
dbSNP
Location
chr:11,65280407
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11545200
0.84[EUR][1000 genomes]
rs11600543
0.96[EUR][1000 genomes]
rs11602375
0.96[EUR][1000 genomes]
rs11605810
0.92[EUR][1000 genomes]
rs11605937
0.84[EUR][1000 genomes]
rs1194337
0.98[EUR][1000 genomes]
rs12799784
0.85[EUR][1000 genomes]
rs34789990
0.96[EUR][1000 genomes]
rs35138901
1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs36085849
0.83[EUR][1000 genomes]
rs3782089
0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs71462347
0.92[EUR][1000 genomes]
rs7935877
0.80[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
NEAT1
Distal transcriptional regulation
MIR612
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)