SNP Report
Basic Infomation
| Name | rs1177304 dbSNP |
|---|---|
| Location | chr:2,61388164 |
| Allele | C/G |
LD-proxy of rSNPs(r2>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1177302 | 0.89[ASN][1000 genomes] |
| rs1177305 | 0.89[ASN][1000 genomes] |
| rs1177307 | 0.91[ASN][1000 genomes] |
| rs1177308 | 0.91[ASN][1000 genomes] |
| rs1177309 | 0.89[ASN][1000 genomes] |
| rs1615070 | 0.85[ASN][1000 genomes] |
| rs1729674 | 0.89[ASN][1000 genomes] |
| rs2600667 | 0.83[AMR][1000 genomes] |
| rs35341794 | 0.82[ASN][1000 genomes] |
| rs35507645 | 0.81[ASN][1000 genomes] |
| rs3889717 | 0.86[ASN][1000 genomes] |
| rs55908966 | 0.82[ASN][1000 genomes] |
| rs72884963 | 0.81[ASN][1000 genomes] |
| rs7558954 | 0.89[ASN][1000 genomes] |
| rs777592 | 0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| KIAA1841 | Proximal transcriptional regulation |
| C2orf74 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014