SNP Report

Basic Infomation

Name	rs11645733 dbSNP
Location	chr:16,23878751
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 32)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11644964	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11646426	0.81[ASN][1000 genomes]
rs11648799	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11862363	0.90[ASN][1000 genomes]
rs12920718	1.00[ASN][1000 genomes]
rs12923695	0.90[ASN][1000 genomes]
rs12929938	0.98[ASN][1000 genomes]
rs12931116	1.00[ASN][1000 genomes]
rs12931600	0.97[ASN][1000 genomes]
rs12934555	0.97[ASN][1000 genomes]
rs1468130	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs35030326	0.99[ASN][1000 genomes]
rs3826259	0.91[ASN][1000 genomes]
rs3826261	0.87[ASN][1000 genomes]
rs55881781	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56098067	0.95[ASN][1000 genomes]
rs56405227	0.93[ASN][1000 genomes]
rs57803503	0.92[ASN][1000 genomes]
rs6497692	0.98[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7189228	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7194054	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7404819	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7405331	0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8044722	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8046693	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8047317	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8052865	0.90[ASN][1000 genomes]
rs8055985	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8056286	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8056423	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8063402	0.90[ASN][1000 genomes]
rs9806904	0.91[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
PRKCB	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)