SNP Report
Name | rs11644907   dbSNP |
---|---|
Location | chr:16,23909985 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10221006 | 0.86[JPT][hapmap] |
rs10775269 | 0.86[JPT][hapmap] |
rs11643715 | 0.83[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs12932420 | 0.86[JPT][hapmap] |
rs12933794 | 0.85[JPT][hapmap] |
rs1858871 | 0.86[JPT][hapmap] |
rs195990 | 0.86[JPT][hapmap] |
rs195991 | 0.85[JPT][hapmap] |
rs2023669 | 0.85[ASN][1000 genomes] |
rs2878156 | 0.95[JPT][hapmap];0.85[ASN][1000 genomes] |
rs3785392 | 0.86[JPT][hapmap] |
rs3785394 | 0.86[JPT][hapmap] |
rs3785396 | 0.90[JPT][hapmap];0.80[TSI][hapmap];0.85[ASN][1000 genomes] |
rs3785397 | 0.90[JPT][hapmap];0.85[ASN][1000 genomes] |
rs6497700 | 0.81[JPT][hapmap] |
rs6497703 | 0.86[JPT][hapmap] |
rs7190694 | 0.90[JPT][hapmap] |
rs7205440 | 0.85[ASN][1000 genomes] |
rs732798 | 0.95[JPT][hapmap];0.84[ASN][1000 genomes] |
rs7404320 | 0.86[JPT][hapmap] |
rs7404928 | 0.90[JPT][hapmap] |
rs8051531 | 0.86[JPT][hapmap] |
rs8051700 | 0.86[JPT][hapmap] |
rs8054675 | 0.85[JPT][hapmap] |
rs8055773 | 0.84[JPT][hapmap] |
rs8057516 | 0.86[JPT][hapmap] |
rs8182198 | 0.90[JPT][hapmap];0.85[ASN][1000 genomes] |
rs9924831 | 0.86[JPT][hapmap] |
rs9924860 | 0.91[JPT][hapmap] |
rs9940072 | 0.86[JPT][hapmap] |
rs9940744 | 0.85[JPT][hapmap] |
Symbol | Regulation type |
---|---|
PRKCB | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014