SNP Report
Name | rs11586401   dbSNP |
---|---|
Location | chr:1,201486928 |
Allele | T/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10753903 | 0.88[JPT][hapmap] |
rs10800786 | 1.00[CHB][hapmap] |
rs11577142 | 0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs11578749 | 0.95[ASN][1000 genomes] |
rs11582434 | 0.87[ASN][1000 genomes] |
rs11586342 | 0.85[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11586391 | 0.95[ASN][1000 genomes] |
rs11588293 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes] |
rs12076873 | 1.00[CHB][hapmap] |
rs12134619 | 1.00[CHB][hapmap] |
rs12728629 | 1.00[CHB][hapmap];1.00[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs1539692 | 1.00[YRI][hapmap] |
rs2152106 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs2152107 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs2184458 | 1.00[CHB][hapmap];0.95[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs3753979 | 1.00[CHB][hapmap] |
rs3753984 | 0.85[ASN][1000 genomes] |
rs3767524 | 1.00[CHB][hapmap] |
rs3767525 | 1.00[CHB][hapmap];0.82[AFR][1000 genomes];0.83[ASN][1000 genomes] |
rs3767532 | 0.83[ASN][1000 genomes] |
rs4310467 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4345829 | 1.00[ASN][1000 genomes] |
rs55683002 | 0.95[ASN][1000 genomes] |
rs58909817 | 0.95[ASN][1000 genomes] |
rs6660613 | 1.00[CHB][hapmap];0.86[JPT][hapmap];0.95[ASN][1000 genomes] |
rs6672166 | 0.95[ASN][1000 genomes] |
rs6689149 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes] |
rs6692330 | 1.00[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes] |
rs682137 | 1.00[CHB][hapmap];0.85[JPT][hapmap] |
rs682600 | 0.86[JPT][hapmap] |
rs7355054 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs7538112 | 0.86[JPT][hapmap] |
rs7552162 | 1.00[CHB][hapmap];0.95[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
RPS10P7 | Proximal transcriptional regulation |
ENSG00000242150 | Proximal transcriptional regulation |
CSRP1 | Distal transcriptional regulation |
ARL8A | Distal transcriptional regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL related gene | Source |
---|---|
RABIF | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014