SNP Report

Basic Infomation

Name	rs11585145 dbSNP
Location	chr:1,154947496
Allele	A/T

LD-proxy of rSNPs(r²>0.8) (count: 25)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10908449	1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11264293	0.96[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1131397	0.97[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11587981	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11590058	0.95[EUR][1000 genomes]
rs12075984	1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12076073	1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12096640	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16836580	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2089247	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2089248	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2878517	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28851228	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3766921	0.97[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59519769	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6661212	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6683093	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6695407	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6696397	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7525164	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7525580	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7528060	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7528548	1.00[ASN][1000 genomes]
rs7535144	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8191979	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SHC1	Proximal transcriptional regulation
CKS1B	Proximal transcriptional regulation
MIR4258	Proximal transcriptional regulation
RRP8	Distal transcriptional regulation
ILK	Distal transcriptional regulation
GABARAPL1	Distal transcriptional regulation
TMPO-AS1	Distal transcriptional regulation
TMPO	Distal transcriptional regulation
HMGB1	Distal transcriptional regulation
B2M	Distal transcriptional regulation
PARN	Distal transcriptional regulation
BFAR	Distal transcriptional regulation
BRIP1	Distal transcriptional regulation
ENSG00000200997	Distal transcriptional regulation
ENSG00000222724	Distal transcriptional regulation
RRM2	Distal transcriptional regulation
FASTKD3	Distal transcriptional regulation
MTRR	Distal transcriptional regulation
HNRNPA2B1	Distal transcriptional regulation
ENSG00000201699	Distal transcriptional regulation
ADAR	Distal transcriptional regulation
ADAM15	Distal transcriptional regulation
EFNA4	Distal transcriptional regulation
ENSG00000251246	Distal transcriptional regulation
ENSG00000232093	Distal transcriptional regulation
EFNA1	Distal transcriptional regulation
MUC1	Distal transcriptional regulation
SCAMP3	Distal transcriptional regulation
CKS1B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)