SNP Report
Basic Infomation
| Name | rs11231545 dbSNP |
|---|---|
| Location | chr:11,63413028 |
| Allele | G/C |
LD-proxy of rSNPs(r2>0.8) (count: 32)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10501394 | 1.00[CEU][hapmap] |
| rs10897442 | 0.83[YRI][hapmap] |
| rs11551942 | 1.00[CEU][hapmap] |
| rs11551944 | 0.91[CEU][hapmap] |
| rs1186605 | 0.87[YRI][hapmap] |
| rs1186941 | 1.00[CEU][hapmap] |
| rs12274980 | 1.00[CEU][hapmap] |
| rs17158453 | 1.00[CEU][hapmap] |
| rs17656941 | 1.00[CEU][hapmap] |
| rs2509744 | 1.00[CEU][hapmap] |
| rs2959880 | 1.00[CEU][hapmap] |
| rs3016865 | 1.00[CEU][hapmap] |
| rs476034 | 1.00[CEU][hapmap] |
| rs476691 | 1.00[CEU][hapmap] |
| rs500991 | 1.00[CEU][hapmap] |
| rs511819 | 1.00[CEU][hapmap] |
| rs517700 | 1.00[CEU][hapmap] |
| rs518490 | 1.00[CEU][hapmap] |
| rs521464 | 1.00[CEU][hapmap] |
| rs523093 | 1.00[CEU][hapmap] |
| rs542998 | 0.82[YRI][hapmap] |
| rs551466 | 1.00[CEU][hapmap] |
| rs566255 | 0.86[YRI][hapmap] |
| rs567756 | 1.00[CEU][hapmap] |
| rs568790 | 1.00[CEU][hapmap] |
| rs580695 | 1.00[CEU][hapmap] |
| rs7111395 | 1.00[CEU][hapmap] |
| rs7127454 | 1.00[CEU][hapmap] |
| rs7128970 | 1.00[CEU][hapmap] |
| rs7928900 | 1.00[CEU][hapmap] |
| rs7943981 | 1.00[CEU][hapmap] |
| rs7945972 | 1.00[CEU][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000256789 | RNA binding protein mediated regulation |
| ATL3 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014