SNP Report

Basic Infomation

Name	rs11186148 dbSNP
Location	chr:10,82340501
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11186151	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12259358	0.94[CHB][hapmap];0.81[JPT][hapmap];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12268524	0.95[CHB][hapmap];0.81[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12572336	0.88[ASN][1000 genomes]
rs12773027	0.95[CHB][hapmap];0.82[JPT][hapmap];0.88[ASN][1000 genomes]
rs12777577	0.95[CHB][hapmap];0.81[JPT][hapmap];0.88[ASN][1000 genomes]
rs1573973	0.81[JPT][hapmap]
rs1913756	0.86[ASN][1000 genomes]
rs1913758	0.89[CHB][hapmap];0.81[JPT][hapmap];0.86[ASN][1000 genomes]
rs1913759	0.89[CHB][hapmap];0.81[JPT][hapmap];0.86[ASN][1000 genomes]
rs1913760	0.89[CHB][hapmap];0.81[JPT][hapmap];0.86[ASN][1000 genomes]
rs34215840	0.88[ASN][1000 genomes]
rs34279451	0.87[ASN][1000 genomes]
rs35154155	0.88[ASN][1000 genomes]
rs35976818	0.87[ASN][1000 genomes]
rs36095216	0.83[ASN][1000 genomes]
rs4291622	0.82[EUR][1000 genomes]
rs4547039	0.81[JPT][hapmap];0.82[EUR][1000 genomes]
rs60390678	0.88[ASN][1000 genomes]
rs6586086	0.84[CHB][hapmap];0.81[JPT][hapmap];0.88[ASN][1000 genomes]
rs6586087	0.88[ASN][1000 genomes]
rs6586088	0.89[CHB][hapmap];0.81[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6586090	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7067623	0.85[ASN][1000 genomes]
rs7072467	0.81[ASN][1000 genomes]
rs7078901	0.81[JPT][hapmap];0.82[EUR][1000 genomes]
rs7081555	0.85[ASN][1000 genomes]
rs7081964	0.87[ASN][1000 genomes]
rs7087827	0.95[CHB][hapmap];0.82[JPT][hapmap];0.88[ASN][1000 genomes]
rs7087969	0.95[CHB][hapmap];0.82[JPT][hapmap];0.88[ASN][1000 genomes]
rs7091134	0.87[ASN][1000 genomes]
rs7092045	0.89[CHB][hapmap];0.81[JPT][hapmap];0.88[ASN][1000 genomes]
rs7092609	0.87[ASN][1000 genomes]
rs7100769	0.89[CHB][hapmap];0.81[JPT][hapmap];0.86[ASN][1000 genomes]
rs7894899	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7897591	0.88[ASN][1000 genomes]
rs7904557	0.81[JPT][hapmap]
rs7909966	0.95[CHB][hapmap];0.81[JPT][hapmap];0.87[ASN][1000 genomes]
rs7917419	0.81[JPT][hapmap]
rs7920037	0.88[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SH2D4B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)