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rVarBase
SNP Report
Basic Infomation
Name
rs11174115  
dbSNP
Location
chr:12,40274325
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11174631
1.00[ASW][hapmap]
rs12423682
1.00[ASW][hapmap]
rs17559800
0.82[MEX][hapmap]
rs535458
1.00[ASW][hapmap]
rs545385
1.00[ASW][hapmap]
rs549790
1.00[ASW][hapmap]
rs953493
0.82[MEX][hapmap]
rSNP related genes
Symbol
Regulation type
ARID2
Distal transcriptional regulation
C12orf40
RNA binding protein mediated regulation
SLC2A13
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)