SNP Report

Basic Infomation

Name	rs11169259 dbSNP
Location	chr:12,50429024
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 48)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10161020	1.00[EUR][1000 genomes]
rs10161120	1.00[EUR][1000 genomes]
rs10875992	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10875993	0.98[EUR][1000 genomes]
rs11169247	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11169256	0.98[EUR][1000 genomes]
rs11169260	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11836389	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12298110	0.98[EUR][1000 genomes]
rs12311010	0.98[EUR][1000 genomes]
rs12317586	0.92[EUR][1000 genomes]
rs17124264	0.94[EUR][1000 genomes]
rs2291612	0.98[EUR][1000 genomes]
rs378943	0.94[EUR][1000 genomes]
rs55802497	0.98[EUR][1000 genomes]
rs55936104	1.00[EUR][1000 genomes]
rs56099252	0.96[EUR][1000 genomes]
rs56159935	0.98[EUR][1000 genomes]
rs56232366	0.92[EUR][1000 genomes]
rs56259551	0.98[EUR][1000 genomes]
rs57014171	0.98[EUR][1000 genomes]
rs60042968	0.98[EUR][1000 genomes]
rs60456498	0.98[EUR][1000 genomes]
rs60905953	0.98[EUR][1000 genomes]
rs611434	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs615382	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs629754	0.94[EUR][1000 genomes]
rs661823	0.81[EUR][1000 genomes]
rs694851	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs706785	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7131715	0.98[EUR][1000 genomes]
rs7303531	0.98[EUR][1000 genomes]
rs7306035	0.94[EUR][1000 genomes]
rs7308994	0.98[EUR][1000 genomes]
rs7309480	0.98[EUR][1000 genomes]
rs7309940	0.98[EUR][1000 genomes]
rs7309966	0.98[EUR][1000 genomes]
rs73119648	0.80[EUR][1000 genomes]
rs73119651	0.98[EUR][1000 genomes]
rs73119671	0.98[EUR][1000 genomes]
rs73119681	1.00[EUR][1000 genomes]
rs73119686	0.82[EUR][1000 genomes]
rs73119688	1.00[EUR][1000 genomes]
rs73119690	1.00[EUR][1000 genomes]
rs7961683	0.98[EUR][1000 genomes]
rs7972522	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7979958	0.98[EUR][1000 genomes]
rs9325146	0.98[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RACGAP1	Proximal transcriptional regulation
RACGAP1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)