SNP Report
Basic Infomation
| Name | rs706785 dbSNP |
|---|---|
| Location | chr:12,50422832 |
| Allele | C/G |
LD-proxy of rSNPs(r2>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10161020 | 0.82[EUR][1000 genomes] |
| rs10161120 | 0.82[EUR][1000 genomes] |
| rs11169259 | 0.82[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs11169260 | 0.82[EUR][1000 genomes] |
| rs12311010 | 0.83[EUR][1000 genomes] |
| rs378943 | 0.82[AFR][1000 genomes];0.83[EUR][1000 genomes] |
| rs55936104 | 0.82[EUR][1000 genomes] |
| rs611434 | 0.84[AFR][1000 genomes];0.81[EUR][1000 genomes] |
| rs615382 | 0.90[AFR][1000 genomes];0.83[EUR][1000 genomes] |
| rs629754 | 0.83[EUR][1000 genomes] |
| rs661823 | 0.84[AFR][1000 genomes] |
| rs694851 | 0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs73119681 | 0.82[EUR][1000 genomes] |
| rs73119688 | 0.82[EUR][1000 genomes] |
| rs73119690 | 0.82[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RACGAP1 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014