SNP Report

Basic Infomation

Name	rs11126031 dbSNP
Location	chr:2,65380357
Allele	A/T

LD-proxy of rSNPs(r²>0.8) (count: 54)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10173422	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10173678	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10185243	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs10187798	0.83[JPT][hapmap]
rs1019303	0.84[JPT][hapmap]
rs1019305	0.84[JPT][hapmap]
rs10195328	0.83[JPT][hapmap]
rs10519011	0.83[JPT][hapmap]
rs11126028	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs11126030	0.84[JPT][hapmap]
rs11678917	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11684110	0.89[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs11888531	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs1228	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs12611491	0.83[JPT][hapmap]
rs12617149	0.84[JPT][hapmap]
rs12621608	0.83[JPT][hapmap]
rs12713532	0.85[CHB][hapmap];0.84[JPT][hapmap]
rs12713533	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs1420183	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs1420184	0.85[CHB][hapmap]
rs1420185	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs17040050	0.84[CHB][hapmap];0.84[JPT][hapmap]
rs17040051	0.84[JPT][hapmap]
rs2052261	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs2241158	0.83[JPT][hapmap]
rs2241160	0.83[JPT][hapmap]
rs2241161	0.83[JPT][hapmap]
rs2249105	0.83[JPT][hapmap]
rs2252867	0.83[JPT][hapmap]
rs2302631	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs2422437	1.00[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap]
rs2422441	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2723085	0.80[CHB][hapmap]
rs2723087	0.80[CHB][hapmap]
rs2723091	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs3732096	1.00[CEU][hapmap];0.94[JPT][hapmap]
rs3732098	0.84[JPT][hapmap]
rs3771105	0.83[JPT][hapmap]
rs4671120	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap]
rs4671638	0.94[CEU][hapmap]
rs6546123	0.85[CHB][hapmap]
rs6546125	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs6546128	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6546131	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6725335	0.84[JPT][hapmap]
rs6736728	0.84[CHB][hapmap];0.83[JPT][hapmap]
rs6741255	0.84[CHB][hapmap]
rs6748462	0.89[CEU][hapmap];0.89[JPT][hapmap]
rs6757520	0.84[JPT][hapmap]
rs7563881	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7597073	0.84[JPT][hapmap]
rs9784118	0.83[JPT][hapmap]
rs984748	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
CEP68	Distal transcriptional regulation
RAB1A	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)