SNP Report

Basic Infomation

Name	rs11074582 dbSNP
Location	chr:16,23864825
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10852255	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10852256	0.88[ASN][1000 genomes]
rs11074583	0.90[ASN][1000 genomes]
rs11074584	0.88[ASN][1000 genomes]
rs11644103	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11645239	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11647116	0.80[ASN][1000 genomes]
rs12443784	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12447916	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12928014	0.88[ASN][1000 genomes]
rs12928465	0.89[ASN][1000 genomes]
rs194795	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2106375	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2106376	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2188355	0.89[ASN][1000 genomes]
rs2575382	0.80[AMR][1000 genomes]
rs2575384	0.80[AMR][1000 genomes]
rs3785403	0.89[ASN][1000 genomes]
rs3826260	0.87[ASN][1000 genomes]
rs3826262	0.89[ASN][1000 genomes]
rs56046165	0.88[ASN][1000 genomes]
rs56061125	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59043745	0.80[AMR][1000 genomes]
rs59790099	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7190426	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72777933	0.89[ASN][1000 genomes]
rs72777934	0.89[ASN][1000 genomes]
rs72777936	0.88[ASN][1000 genomes]
rs73537014	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8056879	0.88[ASN][1000 genomes]
rs916678	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
PRKCB	Distal transcriptional regulation
PRKCB	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)