SNP Report

Basic Infomation

Name	rs10897193 dbSNP
Location	chr:11,61746269
Allele	T/G

LD-proxy of rSNPs(r²>0.8) (count: 14)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10736714	1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.90[GIH][hapmap];0.88[JPT][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10736715	1.00[CEU][hapmap];0.90[CHB][hapmap];0.88[JPT][hapmap];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10792321	0.93[CHB][hapmap];0.86[JPT][hapmap];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10897190	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10897191	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10897192	0.89[CEU][hapmap];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10897194	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.88[JPT][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11230848	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11230849	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.88[JPT][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11230851	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.88[JPT][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12225574	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17156616	0.89[CEU][hapmap];0.86[CHB][hapmap];0.88[YRI][hapmap];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2668897	0.89[CEU][hapmap];0.95[GIH][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.83[YRI][hapmap];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4963438	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000244176	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)