SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10207579	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11692304	0.92[AFR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12712154	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1523200	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4851594	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4851596	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4851602	0.84[ASN][1000 genomes]
rs4851604	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4851608	0.80[AFR][1000 genomes]
rs6719296	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs737231	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7605606	0.82[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC9A4	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)