SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11965062	0.90[JPT][hapmap]
rs4235999	0.90[JPT][hapmap]
rs4710938	0.89[JPT][hapmap]
rs4710939	0.90[JPT][hapmap]
rs9460540	0.83[CHD][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.87[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs9465852	0.85[JPT][hapmap]
rs979614	0.83[CHD][hapmap];0.95[JPT][hapmap];0.90[LWK][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)