SNP Report
Basic Infomation
| Name | rs9788082 dbSNP |
|---|---|
| Location | chr:12,48752056 |
| Allele | C/A |
LD-proxy of rSNPs(r2>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10431526 | 0.86[EUR][1000 genomes] |
| rs10875772 | 0.82[AMR][1000 genomes] |
| rs10875792 | 0.91[EUR][1000 genomes] |
| rs10875793 | 0.91[EUR][1000 genomes] |
| rs10875799 | 0.98[EUR][1000 genomes] |
| rs11168516 | 0.91[EUR][1000 genomes] |
| rs11168536 | 0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes] |
| rs1471997 | 0.94[EUR][1000 genomes] |
| rs2054903 | 0.95[EUR][1000 genomes] |
| rs2054904 | 0.95[EUR][1000 genomes] |
| rs2279464 | 0.83[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs3185921 | 0.98[EUR][1000 genomes] |
| rs3751273 | 0.98[EUR][1000 genomes] |
| rs4760625 | 0.83[AMR][1000 genomes];0.86[EUR][1000 genomes] |
| rs9634261 | 0.88[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000257763 | Proximal transcriptional regulation |
| ZNF641 | Distal transcriptional regulation |
| ENSG00000257735 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014