SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10946406	0.84[GIH][hapmap]
rs4510656	0.84[GIH][hapmap]
rs4710944	0.95[GIH][hapmap];0.94[MEX][hapmap];0.86[AMR][1000 genomes]
rs4710945	0.81[CEU][hapmap];0.92[GIH][hapmap];0.81[TSI][hapmap];0.84[EUR][1000 genomes]
rs4712538	0.84[AMR][1000 genomes]
rs9465875	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465890	0.92[GIH][hapmap];1.00[MEX][hapmap]
rs9465895	0.82[GIH][hapmap]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)