SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2244238	0.85[TSI][hapmap];0.86[EUR][1000 genomes]
rs2244255	0.81[CEU][hapmap];0.86[EUR][1000 genomes]
rs2244364	0.81[CEU][hapmap];0.85[TSI][hapmap];0.86[EUR][1000 genomes]
rs840939	0.84[EUR][1000 genomes]
rs840941	0.85[EUR][1000 genomes]
rs840944	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs840945	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs840946	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs840947	0.91[CHB][hapmap];0.95[CHD][hapmap];0.82[JPT][hapmap];0.85[MKK][hapmap];0.92[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000204929	Distal transcriptional regulation
ENSG00000204929	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
PLEK	SCAN
PROKR1	SCAN