SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 10)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2244238	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2244255	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs702877	0.83[ASN][1000 genomes]
rs840939	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs840941	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs840943	0.81[CEU][hapmap];0.85[TSI][hapmap];0.86[EUR][1000 genomes]
rs840944	0.81[CEU][hapmap];0.86[EUR][1000 genomes]
rs840945	0.85[EUR][1000 genomes]
rs840946	0.85[EUR][1000 genomes]
rs840976	0.90[CHB][hapmap];0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000204929	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 3)