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rVarBase
SNP Report
Basic Infomation
Name
rs840939  
dbSNP
Location
chr:2,65712235
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2244238
0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2244255
0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2244364
0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs702877
0.81[ASN][1000 genomes]
rs840941
0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs840943
0.84[EUR][1000 genomes]
rs840944
0.84[EUR][1000 genomes]
rs840945
0.83[EUR][1000 genomes]
rs840946
0.83[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000204929
Distal transcriptional regulation
ENSG00000204929
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)