SNP Report
| Name | rs8124576   dbSNP |
|---|---|
| Location | chr:20,44573530 |
| Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11569656 | 1.00[AMR][1000 genomes] |
| rs16985440 | 1.00[EUR][1000 genomes] |
| rs3918245 | 1.00[EUR][1000 genomes] |
| rs3918255 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs3918259 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs55851513 | 0.83[AFR][1000 genomes] |
| rs59436835 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs6032631 | 1.00[EUR][1000 genomes] |
| rs6104419 | 1.00[EUR][1000 genomes] |
| rs6104420 | 1.00[EUR][1000 genomes] |
| rs6104421 | 1.00[EUR][1000 genomes] |
| rs61729182 | 1.00[EUR][1000 genomes] |
| rs7267183 | 1.00[AMR][1000 genomes] |
| rs73622634 | 0.88[AFR][1000 genomes] |
| rs73622636 | 0.83[AFR][1000 genomes] |
| rs73908605 | 1.00[AMR][1000 genomes] |
| rs73911145 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| PCIF1 | Proximal transcriptional regulation |
| NEURL2 | Distal transcriptional regulation |
| CTSA | Distal transcriptional regulation |
| ZNF335 | Distal transcriptional regulation |
| ENSG00000201524 | Distal transcriptional regulation |
| SNX21 | Distal transcriptional regulation |
| PCIF1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




