SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12915189	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35110627	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4352025	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4352026	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4454948	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6496696	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7180053	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7496662	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7496865	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7497204	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7497700	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7498042	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8031714	0.98[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000259212	Distal transcriptional regulation
CRTC3	Distal transcriptional regulation
CRTC3	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)