SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12915189	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4352025	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4352026	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4454948	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6496696	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7180053	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7496662	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7496865	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7497204	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7497700	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7498042	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8031714	0.92[ASN][1000 genomes]
rs8038442	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CRTC3	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)