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rVarBase
SNP Report
Basic Infomation
Name
rs7973011  
dbSNP
Location
chr:12,50049857
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11830472
0.87[AFR][1000 genomes]
rs11831670
0.87[AFR][1000 genomes]
rs11831673
1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs11832420
1.00[YRI][hapmap];0.93[AFR][1000 genomes]
rs11833472
0.93[AFR][1000 genomes]
rs11834570
1.00[YRI][hapmap]
rs11835085
1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs3861577
1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs56840810
0.90[AFR][1000 genomes]
rs57489906
0.90[AFR][1000 genomes]
rs7310069
0.90[AFR][1000 genomes]
rs7312037
1.00[YRI][hapmap]
rs7313183
1.00[YRI][hapmap]
rs7960185
1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs7978381
0.87[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
FMNL3
Proximal transcriptional regulation
FMNL3
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)