SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 27)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10877742	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs10877767	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10877823	0.81[JPT][hapmap]
rs10877832	0.81[JPT][hapmap]
rs10877836	0.81[JPT][hapmap]
rs10877840	0.81[JPT][hapmap]
rs11173669	0.81[CHB][hapmap]
rs11173704	0.81[CHB][hapmap]
rs11173979	0.81[CHB][hapmap]
rs11174281	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11174315	0.81[JPT][hapmap]
rs11174338	0.81[JPT][hapmap]
rs11174351	0.81[JPT][hapmap]
rs11174374	0.81[JPT][hapmap]
rs11559994	0.81[JPT][hapmap]
rs11564285	0.81[JPT][hapmap]
rs12230558	0.81[JPT][hapmap]
rs17127268	0.83[YRI][hapmap]
rs4277185	0.80[YRI][hapmap]
rs7297783	0.81[JPT][hapmap]
rs7305863	0.81[JPT][hapmap]
rs7312341	0.81[JPT][hapmap]
rs7316296	0.81[JPT][hapmap]
rs7970063	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7973509	0.81[JPT][hapmap]
rs7974169	0.81[JPT][hapmap]
rs7977137	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC2A13	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)