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rVarBase
SNP Report
Basic Infomation
Name
rs7950543  
dbSNP
Location
chr:11,63599440
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10897465
0.90[AFR][1000 genomes]
rs11231643
1.00[AFR][1000 genomes]
rs11231655
0.81[AFR][1000 genomes]
rs12417507
0.90[AFR][1000 genomes]
rs12421757
0.90[AFR][1000 genomes]
rs12792726
0.89[AFR][1000 genomes]
rs12797540
0.90[AFR][1000 genomes]
rs224173
0.89[AFR][1000 genomes]
rs3019785
0.89[AFR][1000 genomes]
rs3740637
0.90[AFR][1000 genomes]
rs449047
0.89[AFR][1000 genomes]
rs454474
0.89[AFR][1000 genomes]
rs4980499
0.90[AFR][1000 genomes]
rs4980500
0.90[AFR][1000 genomes]
rs7112348
0.90[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
MARK2
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)