SNP Report

Basic Infomation

Name	rs7921820 dbSNP
Location	chr:10,35554947
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 32)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1018497	0.82[ASN][1000 genomes]
rs12098425	0.88[ASN][1000 genomes]
rs12242110	0.84[GIH][hapmap]
rs12242132	0.87[ASN][1000 genomes]
rs12255327	0.87[ASN][1000 genomes]
rs12261843	0.86[GIH][hapmap]
rs12413630	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12777960	0.84[GIH][hapmap]
rs1531550	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs16915801	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs16915805	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs16935874	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs16935888	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs16935902	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs16935907	0.83[ASN][1000 genomes]
rs16935909	0.83[ASN][1000 genomes]
rs16935910	0.95[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs16935948	0.84[GIH][hapmap]
rs2295415	0.89[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs3740082	0.89[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs3936503	0.84[GIH][hapmap]
rs4007273	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4102764	0.89[ASN][1000 genomes]
rs4102767	0.87[ASN][1000 genomes]
rs4244996	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4934726	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs4934735	0.81[JPT][hapmap]
rs55972637	0.93[ASN][1000 genomes]
rs59428109	0.83[ASN][1000 genomes]
rs7069103	0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73262832	0.83[ASN][1000 genomes]
rs7914560	0.84[GIH][hapmap]

rSNP related genes

Symbol	Regulation type
CCNY	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)