SNP Report

Basic Infomation

Name	rs1018497 dbSNP
Location	chr:10,35505079
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12098425	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12242132	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12255327	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12413630	0.82[ASN][1000 genomes]
rs1531550	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16915801	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16915805	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16935840	0.82[EUR][1000 genomes]
rs16935874	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16935881	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16935888	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16935889	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16935902	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16935904	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16935907	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16935909	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16935910	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2045916	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2045919	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2295415	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34093691	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35808464	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3740082	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4007273	0.84[ASN][1000 genomes]
rs4244993	0.81[EUR][1000 genomes]
rs4244996	0.84[ASN][1000 genomes]
rs4934534	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4934712	0.83[EUR][1000 genomes]
rs4934717	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4934726	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4934729	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4934733	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55807054	0.82[EUR][1000 genomes]
rs55914658	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55972637	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs58552047	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59428109	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61291084	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73262832	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7921820	0.82[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000230534	Distal transcriptional regulation
CREM	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)