SNP Report

Basic Infomation

Name	rs4007273 dbSNP
Location	chr:10,35546897
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1018497	0.84[ASN][1000 genomes]
rs12098425	0.87[ASN][1000 genomes]
rs12242132	0.87[ASN][1000 genomes]
rs12255327	0.87[ASN][1000 genomes]
rs12413630	0.97[ASN][1000 genomes]
rs1531550	0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16915801	0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16915805	0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16935874	0.94[CHB][hapmap];0.93[JPT][hapmap]
rs16935888	0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16935889	0.81[ASN][1000 genomes]
rs16935902	0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16935904	0.81[ASN][1000 genomes]
rs16935907	0.85[ASN][1000 genomes]
rs16935909	0.85[ASN][1000 genomes]
rs16935910	0.94[CHB][hapmap];0.93[JPT][hapmap];0.83[ASN][1000 genomes]
rs2045919	0.81[ASN][1000 genomes]
rs2295415	0.89[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs34093691	0.81[ASN][1000 genomes]
rs35808464	0.81[ASN][1000 genomes]
rs3740082	0.89[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs4102764	0.89[ASN][1000 genomes]
rs4102767	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4244996	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4934726	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs4934735	0.81[JPT][hapmap]
rs55914658	0.81[ASN][1000 genomes]
rs55972637	0.92[ASN][1000 genomes]
rs58552047	0.80[ASN][1000 genomes]
rs59428109	0.85[ASN][1000 genomes]
rs7069103	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73262832	0.85[ASN][1000 genomes]
rs7921820	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCNY	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)