SNP Report

Basic Infomation

Name	rs7895832 dbSNP
Location	chr:10,94276526
Allele	A/T

LD-proxy of rSNPs(r²>0.8) (count: 34)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10882069	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10882070	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10882078	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10882086	0.85[CEU][hapmap];0.89[CHB][hapmap];0.84[JPT][hapmap]
rs10882088	0.85[CEU][hapmap];0.89[CHB][hapmap];0.84[JPT][hapmap]
rs11186999	0.82[AFR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11187077	0.90[EUR][1000 genomes]
rs11187108	0.85[CEU][hapmap];0.89[CHB][hapmap]
rs11187115	0.88[CEU][hapmap];0.90[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap]
rs11595187	0.88[CEU][hapmap];0.89[CHB][hapmap];1.00[YRI][hapmap]
rs12218329	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12414433	0.92[EUR][1000 genomes]
rs12416180	1.00[CEU][hapmap];0.90[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17107734	1.00[CEU][hapmap];0.88[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1999763	1.00[CEU][hapmap];0.89[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1999764	1.00[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2275219	0.85[CEU][hapmap];0.89[CHB][hapmap];0.84[JPT][hapmap]
rs2297743	0.88[CEU][hapmap];0.90[CHB][hapmap];0.85[JPT][hapmap]
rs2421940	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35973022	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3758503	1.00[CEU][hapmap];0.89[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.92[EUR][1000 genomes]
rs3758505	1.00[CEU][hapmap];0.89[CHB][hapmap];0.89[JPT][hapmap];0.92[EUR][1000 genomes]
rs3781237	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4646954	0.84[JPT][hapmap];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4933731	0.85[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap]
rs59415214	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6583820	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7068618	1.00[CEU][hapmap];0.89[CHB][hapmap];0.89[JPT][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7075851	1.00[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7079099	1.00[CEU][hapmap];0.89[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7089987	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7900584	1.00[CEU][hapmap];0.89[CHB][hapmap];0.89[JPT][hapmap];0.92[EUR][1000 genomes]
rs7910605	0.90[CHB][hapmap];0.85[JPT][hapmap]
rs7916460	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IDE	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)