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rVarBase
SNP Report
Basic Infomation
Name
rs778756  
dbSNP
Location
chr:2,61781994
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2427884
0.81[AFR][1000 genomes]
rs2518934
0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2592350
0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs3087898
0.83[ASN][1000 genomes]
rs6545883
0.83[AFR][1000 genomes]
rs778753
0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs778755
0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs778757
0.90[ASN][1000 genomes]
rs778758
0.82[EUR][1000 genomes]
rs778760
0.88[ASN][1000 genomes]
rs778762
0.82[EUR][1000 genomes]
rs778763
0.81[EUR][1000 genomes]
rs778764
0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000266768
Proximal transcriptional regulation
XPO1
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)