SNP Report

Basic Infomation

Name	rs2427884 dbSNP
Location	chr:2,61775369
Allele	G/A/C

LD-proxy of rSNPs(r²>0.8) (count: 53)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10173974	0.85[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs10186325	0.86[AMR][1000 genomes]
rs10206598	0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs11125885	0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs11678419	0.83[AMR][1000 genomes]
rs11887205	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12612982	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs12617911	0.82[AMR][1000 genomes]
rs12713438	0.84[AMR][1000 genomes]
rs13413337	0.88[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs1562308	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1562309	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2084195	0.84[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2305155	0.82[AMR][1000 genomes]
rs2421207	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2441380	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2592355	0.84[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2592357	0.89[ASN][1000 genomes]
rs2592358	0.88[ASN][1000 genomes]
rs28749199	0.88[ASN][1000 genomes]
rs2921718	0.96[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs3094312	0.80[ASN][1000 genomes]
rs34484204	0.80[ASN][1000 genomes]
rs3732170	0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs3732171	0.86[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs3771258	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs3771260	0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs3771261	0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4325736	0.86[ASN][1000 genomes]
rs6545873	0.81[AMR][1000 genomes]
rs6545883	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6545887	0.86[ASN][1000 genomes]
rs6707830	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6718887	0.84[AMR][1000 genomes]
rs6734830	0.83[AMR][1000 genomes]
rs6742276	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7421663	0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs7561229	0.82[AMR][1000 genomes]
rs7563678	0.84[AMR][1000 genomes]
rs7574631	0.89[ASN][1000 genomes]
rs766447	0.82[AMR][1000 genomes]
rs778752	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs778753	0.81[AFR][1000 genomes]
rs778755	0.81[AFR][1000 genomes]
rs778756	0.81[AFR][1000 genomes]
rs778758	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs778762	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs778763	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9309336	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs9309337	0.90[ASN][1000 genomes]
rs9807965	0.83[AMR][1000 genomes]
rs9989775	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9989864	0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
XPO1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)