SNP Report
Name | rs2441380   dbSNP |
---|---|
Location | chr:2,61775364 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10173974 | 0.84[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs10186325 | 0.85[AMR][1000 genomes] |
rs10206598 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs11125885 | 0.87[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs11678419 | 0.86[AMR][1000 genomes] |
rs11887205 | 0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12473030 | 0.83[AMR][1000 genomes] |
rs12612677 | 0.83[AMR][1000 genomes] |
rs12612982 | 0.85[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs12617911 | 0.81[AMR][1000 genomes] |
rs12713437 | 0.83[AMR][1000 genomes] |
rs13413337 | 0.83[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs1562308 | 0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1562309 | 0.95[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs2084195 | 0.83[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs2305155 | 0.81[AMR][1000 genomes] |
rs2305156 | 0.83[AMR][1000 genomes] |
rs2421207 | 0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2427884 | 0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2592355 | 0.87[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs2592357 | 0.90[ASN][1000 genomes] |
rs2592358 | 0.89[ASN][1000 genomes] |
rs28749199 | 0.80[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs2921718 | 0.94[AMR][1000 genomes];0.91[ASN][1000 genomes] |
rs3094312 | 0.82[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs34484204 | 0.82[ASN][1000 genomes] |
rs3732170 | 0.87[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs3732171 | 0.85[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs3771258 | 0.87[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs3771260 | 0.85[AMR][1000 genomes];0.91[ASN][1000 genomes] |
rs3771261 | 0.85[AMR][1000 genomes];0.91[ASN][1000 genomes] |
rs4325736 | 0.87[ASN][1000 genomes] |
rs6545872 | 0.81[AMR][1000 genomes] |
rs6545877 | 0.83[AMR][1000 genomes] |
rs6545883 | 0.93[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs6545887 | 0.87[ASN][1000 genomes] |
rs6707830 | 0.83[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs6742276 | 0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7421663 | 0.86[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs7557230 | 0.81[AMR][1000 genomes] |
rs7561229 | 0.81[AMR][1000 genomes] |
rs7574631 | 0.91[ASN][1000 genomes] |
rs7606167 | 0.83[AMR][1000 genomes] |
rs766447 | 0.81[AMR][1000 genomes] |
rs778752 | 0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs778758 | 0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs778762 | 0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs778763 | 0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9309336 | 0.87[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs9309337 | 0.92[ASN][1000 genomes] |
rs9989775 | 0.87[AMR][1000 genomes];0.91[ASN][1000 genomes] |
rs9989864 | 0.85[AMR][1000 genomes];0.91[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
XPO1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014