SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10484632	1.00[JPT][hapmap]
rs10484635	1.00[JPT][hapmap]
rs11963217	1.00[JPT][hapmap]
rs11970425	1.00[JPT][hapmap]
rs13190727	1.00[JPT][hapmap]
rs13190734	1.00[JPT][hapmap]
rs13194407	1.00[JPT][hapmap]
rs13194858	0.93[CEU][hapmap];1.00[JPT][hapmap];0.83[MKK][hapmap];0.82[TSI][hapmap];0.80[EUR][1000 genomes]
rs13199286	0.84[AMR][1000 genomes]
rs13203361	1.00[JPT][hapmap]
rs13203450	0.93[CEU][hapmap]
rs16883951	1.00[JPT][hapmap]
rs16884072	1.00[JPT][hapmap]
rs16884074	1.00[JPT][hapmap]
rs17823073	1.00[JPT][hapmap]
rs1883641	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs34525680	0.93[CEU][hapmap];1.00[JPT][hapmap];0.82[TSI][hapmap];0.80[EUR][1000 genomes]
rs6904566	0.93[CEU][hapmap];1.00[JPT][hapmap];0.82[MKK][hapmap];0.82[TSI][hapmap];0.80[EUR][1000 genomes]
rs6905138	0.93[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs6909633	1.00[CHD][hapmap]
rs6925233	1.00[JPT][hapmap]
rs6927356	0.93[CEU][hapmap];1.00[JPT][hapmap];0.82[MKK][hapmap];0.82[TSI][hapmap];0.80[EUR][1000 genomes]
rs6933219	1.00[JPT][hapmap]
rs736425	1.00[JPT][hapmap]
rs7749083	1.00[JPT][hapmap]
rs9460517	0.91[CEU][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9460541	1.00[JPT][hapmap]
rs9460542	1.00[JPT][hapmap]
rs981042	1.00[JPT][hapmap]
rs981043	1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
E2F3	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 1)