SNP Report

Basic Infomation

Name	rs7763704 dbSNP
Location	chr:6,20881404
Allele	A/T

LD-proxy of rSNPs(r²>0.8) (count: 80)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10806924	1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[ASN][1000 genomes]
rs10806925	0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs10806927	0.89[ASN][1000 genomes]
rs10946412	0.90[ASN][1000 genomes]
rs10946414	0.84[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs11968853	0.84[ASN][1000 genomes]
rs12111182	0.84[ASN][1000 genomes]
rs12198243	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12209113	0.89[ASN][1000 genomes]
rs12213956	0.90[ASN][1000 genomes]
rs12215186	0.89[ASN][1000 genomes]
rs12661606	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs2745933	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs2819993	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs2819997	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs2820000	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs4077405	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4131667	1.00[CEU][hapmap];0.90[CHB][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4330530	0.86[ASN][1000 genomes]
rs4373348	0.86[ASN][1000 genomes]
rs4395717	0.90[CHB][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]
rs4446563	0.89[ASN][1000 genomes]
rs4478387	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs4492184	0.81[CEU][hapmap]
rs4546483	0.91[YRI][hapmap]
rs4585542	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs4612156	0.91[YRI][hapmap]
rs4712545	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs4712549	0.86[ASN][1000 genomes]
rs4712551	0.80[CEU][hapmap]
rs4712552	0.90[ASN][1000 genomes]
rs4712553	0.90[ASN][1000 genomes]
rs4712554	0.86[ASN][1000 genomes]
rs4712555	0.91[ASN][1000 genomes]
rs62399349	0.88[ASN][1000 genomes]
rs6456379	0.84[CEU][hapmap]
rs6901110	0.89[ASN][1000 genomes]
rs6902880	0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs6915746	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6923264	0.91[ASN][1000 genomes]
rs6926335	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6936300	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs6936840	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs6938757	0.91[ASN][1000 genomes]
rs7747989	0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs7752140	0.88[ASN][1000 genomes]
rs7752310	0.88[ASN][1000 genomes]
rs7772390	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs9348443	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs9348444	0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs9348445	0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs9348447	0.89[ASN][1000 genomes]
rs9350296	0.81[CEU][hapmap]
rs9350297	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9356752	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs9358366	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs9358372	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs9366367	1.00[CEU][hapmap];0.95[CHB][hapmap];0.83[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9368232	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs9368238	0.81[CHB][hapmap]
rs9368240	0.89[ASN][1000 genomes]
rs9460558	0.86[ASN][1000 genomes]
rs9460559	0.80[CHB][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs9460562	0.88[ASN][1000 genomes]
rs9460563	0.95[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs9465886	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs9465891	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs9465897	0.90[CHB][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs9465898	0.88[ASN][1000 genomes]
rs9465899	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs9465900	0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9465902	0.85[ASN][1000 genomes]
rs9465904	0.95[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs9465905	0.91[ASN][1000 genomes]
rs9465906	0.91[ASN][1000 genomes]
rs9465907	0.91[ASN][1000 genomes]
rs9465909	0.91[ASN][1000 genomes]
rs9465910	0.88[ASN][1000 genomes]
rs9465913	0.89[ASN][1000 genomes]
rs9465923	0.86[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)