SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10900804	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11242103	0.82[EUR][1000 genomes]
rs1469149	0.82[EUR][1000 genomes]
rs2069614	0.93[EUR][1000 genomes]
rs2069616	0.94[EUR][1000 genomes]
rs2069803	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3091338	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3852206	0.99[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3864277	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4705916	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs721121	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs743564	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000253067	Distal transcriptional regulation
CSF2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)