SNP Report

Basic Infomation

Name	rs7562809 dbSNP
Location	chr:2,65278144
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 38)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1009358	0.80[JPT][hapmap]
rs1009360	0.80[JPT][hapmap]
rs10165691	0.80[ASN][1000 genomes]
rs10187798	0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs1019303	0.89[JPT][hapmap];0.80[ASN][1000 genomes]
rs1019305	0.89[JPT][hapmap];0.80[ASN][1000 genomes]
rs10195328	0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs10496122	0.83[ASN][1000 genomes]
rs10519011	0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs11126030	0.89[JPT][hapmap]
rs11885480	0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs12472234	0.80[ASN][1000 genomes]
rs12611491	0.89[JPT][hapmap];0.86[ASN][1000 genomes]
rs12617149	0.89[JPT][hapmap]
rs12619806	0.81[ASN][1000 genomes]
rs12623206	0.80[ASN][1000 genomes]
rs12713529	0.81[ASN][1000 genomes]
rs13012648	0.83[ASN][1000 genomes]
rs1558659	0.80[ASN][1000 genomes]
rs1558660	0.80[ASN][1000 genomes]
rs17040051	0.89[JPT][hapmap];0.80[ASN][1000 genomes]
rs2241140	0.83[JPT][hapmap];0.83[ASN][1000 genomes]
rs2241158	0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs2302647	0.80[JPT][hapmap]
rs2540950	0.80[JPT][hapmap]
rs34374525	0.80[ASN][1000 genomes]
rs3732098	0.89[JPT][hapmap];0.82[ASN][1000 genomes]
rs3771105	0.89[JPT][hapmap];0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4671115	0.81[ASN][1000 genomes]
rs55952639	0.86[ASN][1000 genomes]
rs6725335	0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs6741843	0.81[ASN][1000 genomes]
rs6757520	0.89[JPT][hapmap];0.80[ASN][1000 genomes]
rs7559813	0.80[JPT][hapmap]
rs7595521	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7597073	0.89[JPT][hapmap];0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7601712	0.86[CHB][hapmap]
rs9784118	0.89[JPT][hapmap];0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CEP68	Distal transcriptional regulation
ENSG00000232613	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)