SNP Report
Basic Infomation
| Name | rs73788709 dbSNP |
|---|---|
| Location | chr:5,130923324 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 83)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1044402 | 1.00[EUR][1000 genomes] |
| rs11953301 | 1.00[EUR][1000 genomes] |
| rs12108829 | 1.00[EUR][1000 genomes] |
| rs12108954 | 1.00[EUR][1000 genomes] |
| rs12109782 | 1.00[EUR][1000 genomes] |
| rs12110164 | 1.00[EUR][1000 genomes] |
| rs17167499 | 1.00[EUR][1000 genomes] |
| rs17167682 | 1.00[EUR][1000 genomes] |
| rs17167683 | 1.00[EUR][1000 genomes] |
| rs4526097 | 1.00[EUR][1000 genomes] |
| rs55642088 | 1.00[EUR][1000 genomes] |
| rs55734376 | 1.00[EUR][1000 genomes] |
| rs55750965 | 1.00[EUR][1000 genomes] |
| rs55894225 | 1.00[EUR][1000 genomes] |
| rs55923765 | 1.00[EUR][1000 genomes] |
| rs55939271 | 1.00[EUR][1000 genomes] |
| rs56100851 | 1.00[EUR][1000 genomes] |
| rs56121529 | 1.00[EUR][1000 genomes] |
| rs56163891 | 1.00[EUR][1000 genomes] |
| rs56187427 | 1.00[EUR][1000 genomes] |
| rs56225468 | 1.00[EUR][1000 genomes] |
| rs56235343 | 1.00[EUR][1000 genomes] |
| rs56262921 | 1.00[EUR][1000 genomes] |
| rs56293510 | 1.00[EUR][1000 genomes] |
| rs56693198 | 1.00[EUR][1000 genomes] |
| rs56796052 | 1.00[EUR][1000 genomes] |
| rs56867565 | 1.00[EUR][1000 genomes] |
| rs57101164 | 1.00[EUR][1000 genomes] |
| rs57102410 | 1.00[EUR][1000 genomes] |
| rs57157881 | 1.00[EUR][1000 genomes] |
| rs57505395 | 1.00[EUR][1000 genomes] |
| rs57623245 | 1.00[EUR][1000 genomes] |
| rs57727293 | 1.00[EUR][1000 genomes] |
| rs58222800 | 1.00[EUR][1000 genomes] |
| rs58816971 | 1.00[EUR][1000 genomes] |
| rs60418447 | 1.00[EUR][1000 genomes] |
| rs60844708 | 1.00[EUR][1000 genomes] |
| rs61077793 | 1.00[EUR][1000 genomes] |
| rs61122547 | 1.00[EUR][1000 genomes] |
| rs61216813 | 1.00[EUR][1000 genomes] |
| rs61483560 | 1.00[EUR][1000 genomes] |
| rs6897008 | 1.00[EUR][1000 genomes] |
| rs6897210 | 1.00[EUR][1000 genomes] |
| rs6897507 | 1.00[EUR][1000 genomes] |
| rs6897639 | 1.00[EUR][1000 genomes] |
| rs73786659 | 1.00[EUR][1000 genomes] |
| rs73786660 | 1.00[EUR][1000 genomes] |
| rs73786665 | 1.00[EUR][1000 genomes] |
| rs73786668 | 1.00[EUR][1000 genomes] |
| rs73786670 | 1.00[EUR][1000 genomes] |
| rs73786672 | 1.00[EUR][1000 genomes] |
| rs73786678 | 1.00[EUR][1000 genomes] |
| rs73786680 | 1.00[EUR][1000 genomes] |
| rs73786681 | 1.00[EUR][1000 genomes] |
| rs73786687 | 1.00[EUR][1000 genomes] |
| rs73786689 | 1.00[EUR][1000 genomes] |
| rs73786692 | 1.00[EUR][1000 genomes] |
| rs73786694 | 1.00[EUR][1000 genomes] |
| rs73786695 | 1.00[EUR][1000 genomes] |
| rs73786696 | 1.00[EUR][1000 genomes] |
| rs73786697 | 1.00[EUR][1000 genomes] |
| rs73788703 | 1.00[EUR][1000 genomes] |
| rs73788706 | 1.00[EUR][1000 genomes] |
| rs73788710 | 1.00[EUR][1000 genomes] |
| rs73788711 | 1.00[EUR][1000 genomes] |
| rs73788713 | 1.00[EUR][1000 genomes] |
| rs73788715 | 1.00[EUR][1000 genomes] |
| rs73788723 | 1.00[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73788724 | 1.00[EUR][1000 genomes] |
| rs73788728 | 1.00[EUR][1000 genomes] |
| rs73788729 | 1.00[EUR][1000 genomes] |
| rs73788731 | 1.00[EUR][1000 genomes] |
| rs73788758 | 1.00[EUR][1000 genomes] |
| rs73788765 | 1.00[EUR][1000 genomes] |
| rs73788766 | 1.00[EUR][1000 genomes] |
| rs73788769 | 1.00[EUR][1000 genomes] |
| rs73788770 | 1.00[EUR][1000 genomes] |
| rs73788772 | 1.00[EUR][1000 genomes] |
| rs73788773 | 1.00[EUR][1000 genomes] |
| rs73788774 | 1.00[EUR][1000 genomes] |
| rs7708521 | 1.00[EUR][1000 genomes] |
| rs7730790 | 1.00[EUR][1000 genomes] |
| rs9765486 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RAPGEF6 | RNA binding protein mediated regulation |
| FNIP1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014