SNP Report
Name | rs73485123   dbSNP |
---|---|
Location | chr:15,91011844 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs12438963 | 1.00[EUR][1000 genomes] |
rs12439535 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12439754 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12440307 | 0.83[EUR][1000 genomes] |
rs12441335 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12441772 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs12442600 | 0.83[EUR][1000 genomes] |
rs12442739 | 1.00[EUR][1000 genomes] |
rs2238326 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2283440 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs2283446 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2301830 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2301831 | 0.85[AFR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs3743412 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs7178665 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73485128 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
IQGAP1 | Proximal transcriptional regulation |
IQGAP1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014