SNP Report
| Name | rs73298792   dbSNP |
|---|---|
| Location | chr:12,48886111 |
| Allele | C/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11168585 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs12306781 | 1.00[AMR][1000 genomes] |
| rs12424337 | 0.81[AFR][1000 genomes] |
| rs12425950 | 0.85[AFR][1000 genomes] |
| rs2705132 | 0.83[AMR][1000 genomes] |
| rs4760714 | 0.83[AFR][1000 genomes] |
| rs58537022 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs60874066 | 0.83[AFR][1000 genomes] |
| rs73296803 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73296804 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73296814 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73298779 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73298787 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73298791 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73302549 | 0.86[AFR][1000 genomes] |
| rs74087209 | 0.83[AFR][1000 genomes] |
| rs74090293 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74090301 | 1.00[AMR][1000 genomes] |
| rs74090903 | 1.00[AMR][1000 genomes] |
| rs9788163 | 0.83[AFR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| C12orf54 | Proximal transcriptional regulation |
| RPS10P20 | Distal transcriptional regulation |
| C12orf54 | Distal transcriptional regulation |
| ENSG00000258121 | RNA binding protein mediated regulation |
| C12orf54 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




