SNP Report
Basic Infomation
| Name | rs11168585 dbSNP |
|---|---|
| Location | chr:12,48853583 |
| Allele | T/A |
LD-proxy of rSNPs(r2>0.8) (count: 33)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10875834 | 1.00[EUR][1000 genomes] |
| rs11168583 | 1.00[EUR][1000 genomes] |
| rs11830164 | 1.00[EUR][1000 genomes] |
| rs11832320 | 1.00[EUR][1000 genomes] |
| rs11833210 | 1.00[EUR][1000 genomes] |
| rs11833394 | 1.00[EUR][1000 genomes] |
| rs11833669 | 1.00[EUR][1000 genomes] |
| rs11837337 | 1.00[EUR][1000 genomes] |
| rs11838121 | 1.00[EUR][1000 genomes] |
| rs12300165 | 1.00[EUR][1000 genomes] |
| rs12300339 | 1.00[EUR][1000 genomes] |
| rs12304826 | 1.00[EUR][1000 genomes] |
| rs12305150 | 1.00[EUR][1000 genomes] |
| rs12306781 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs17234937 | 0.82[AFR][1000 genomes] |
| rs2705132 | 0.83[AMR][1000 genomes] |
| rs36119652 | 1.00[EUR][1000 genomes] |
| rs55956587 | 1.00[EUR][1000 genomes] |
| rs58537022 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs59304927 | 1.00[EUR][1000 genomes] |
| rs59708884 | 1.00[EUR][1000 genomes] |
| rs61942829 | 0.82[AFR][1000 genomes] |
| rs73296803 | 1.00[AMR][1000 genomes] |
| rs73296804 | 1.00[AMR][1000 genomes] |
| rs73296814 | 1.00[AMR][1000 genomes] |
| rs73298779 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73298787 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73298791 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73298792 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74089357 | 1.00[EUR][1000 genomes] |
| rs74090293 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74090301 | 1.00[AMR][1000 genomes] |
| rs74090903 | 1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| C12orf54 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014