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rVarBase
SNP Report
Basic Infomation
Name
rs74090301  
dbSNP
Location
chr:12,48888743
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11168585
1.00[AMR][1000 genomes]
rs12306781
1.00[AMR][1000 genomes]
rs2705132
0.83[AMR][1000 genomes]
rs58537022
1.00[AMR][1000 genomes]
rs73296803
1.00[AMR][1000 genomes]
rs73296804
1.00[AMR][1000 genomes]
rs73296814
1.00[AMR][1000 genomes]
rs73298779
1.00[AMR][1000 genomes]
rs73298787
1.00[AMR][1000 genomes]
rs73298791
1.00[AMR][1000 genomes]
rs73298792
1.00[AMR][1000 genomes]
rs74090293
1.00[AMR][1000 genomes]
rs74090903
0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
C12orf54
Proximal transcriptional regulation
OR8S1
Distal transcriptional regulation
ENSG00000258121
RNA binding protein mediated regulation
C12orf54
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)