SNP Report
| Name | rs7316275   dbSNP |
|---|---|
| Location | chr:12,48569381 |
| Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs55759881 | 0.83[AMR][1000 genomes] |
| rs55789595 | 0.83[AMR][1000 genomes] |
| rs55991805 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs56187356 | 0.85[AFR][1000 genomes] |
| rs57539024 | 1.00[AMR][1000 genomes] |
| rs58148022 | 0.83[AMR][1000 genomes] |
| rs58373242 | 0.83[AMR][1000 genomes] |
| rs59051221 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs59182752 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs59643562 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs59787033 | 1.00[AMR][1000 genomes] |
| rs59896935 | 1.00[AMR][1000 genomes] |
| rs60001451 | 1.00[AMR][1000 genomes] |
| rs60316794 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs61558457 | 1.00[AMR][1000 genomes] |
| rs61750873 | 0.83[AMR][1000 genomes] |
| rs74086781 | 0.83[AMR][1000 genomes] |
| rs74086968 | 0.83[AMR][1000 genomes] |
| rs74086984 | 1.00[AMR][1000 genomes] |
| rs74089112 | 1.00[AMR][1000 genomes] |
| rs74089120 | 1.00[AMR][1000 genomes] |
| rs74089127 | 1.00[AMR][1000 genomes] |
| rs74089135 | 1.00[AMR][1000 genomes] |
| rs74089149 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74089151 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74089154 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74089155 | 0.85[AFR][1000 genomes] |
| rs74089161 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74089171 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74089540 | 0.83[AMR][1000 genomes] |
| rs74089548 | 0.83[AMR][1000 genomes] |
| rs74089549 | 0.83[AMR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| PFKM | Distal transcriptional regulation |
| SENP1 | Distal transcriptional regulation |
| OR10AD1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




