SNP Report
Basic Infomation
| Name | rs7303895 dbSNP |
|---|---|
| Location | chr:12,48077073 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 27)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12423045 | 0.93[EUR][1000 genomes] |
| rs36123489 | 0.87[AFR][1000 genomes] |
| rs4348981 | 1.00[YRI][hapmap];0.84[AFR][1000 genomes] |
| rs4550297 | 1.00[YRI][hapmap];0.84[AFR][1000 genomes] |
| rs57671593 | 0.87[AFR][1000 genomes] |
| rs57848393 | 0.87[EUR][1000 genomes] |
| rs67201012 | 0.87[EUR][1000 genomes] |
| rs67408202 | 0.87[EUR][1000 genomes] |
| rs7304743 | 1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73102195 | 1.00[EUR][1000 genomes] |
| rs73102201 | 1.00[EUR][1000 genomes] |
| rs73104103 | 1.00[EUR][1000 genomes] |
| rs73104104 | 1.00[EUR][1000 genomes] |
| rs73104111 | 1.00[EUR][1000 genomes] |
| rs73104115 | 1.00[EUR][1000 genomes] |
| rs73104116 | 1.00[EUR][1000 genomes] |
| rs73104138 | 0.93[EUR][1000 genomes] |
| rs73104143 | 0.93[EUR][1000 genomes] |
| rs73104148 | 0.93[EUR][1000 genomes] |
| rs73104152 | 0.93[EUR][1000 genomes] |
| rs73104155 | 0.93[EUR][1000 genomes] |
| rs73104161 | 0.93[EUR][1000 genomes] |
| rs73104163 | 0.93[EUR][1000 genomes] |
| rs73104177 | 0.87[EUR][1000 genomes] |
| rs73104184 | 0.87[EUR][1000 genomes] |
| rs73104188 | 0.87[EUR][1000 genomes] |
| rs73300653 | 0.87[AFR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RPAP3 | Distal transcriptional regulation |
| ENSG00000257433 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
| eQTL related gene | Source |
|---|---|
| FLJ21908 | Pritchard |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014