SNP Report

Basic Infomation

Name	rs73104163 dbSNP
Location	chr:12,48099970
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12423045	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57848393	0.95[EUR][1000 genomes]
rs67201012	0.95[EUR][1000 genomes]
rs67408202	0.95[EUR][1000 genomes]
rs7303895	0.93[EUR][1000 genomes]
rs7304743	0.93[EUR][1000 genomes]
rs73102195	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73102201	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73104103	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73104104	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73104111	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73104115	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73104116	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73104138	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73104143	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73104148	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73104152	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73104155	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73104161	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73104177	1.00[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs73104184	1.00[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs73104188	0.95[EUR][1000 genomes]
rs73104190	1.00[AFR][1000 genomes]
rs73104197	1.00[AFR][1000 genomes]
rs73105818	1.00[AFR][1000 genomes]
rs73105829	1.00[AFR][1000 genomes]
rs73105845	1.00[AFR][1000 genomes]
rs73105847	1.00[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RPAP3	Proximal transcriptional regulation
STOX1	Distal transcriptional regulation
MYADM	Distal transcriptional regulation
FAM174B	Distal transcriptional regulation
HIRIP3	Distal transcriptional regulation
INO80E	Distal transcriptional regulation
HAUS8	Distal transcriptional regulation
BRIX1	Distal transcriptional regulation
RAD1	Distal transcriptional regulation
RALA	Distal transcriptional regulation
TUBB4B	Distal transcriptional regulation
RPAP3	Distal transcriptional regulation
SLC48A1	Distal transcriptional regulation
HDAC7	Distal transcriptional regulation
TMEM106C	Distal transcriptional regulation
RAPGEF3	Distal transcriptional regulation
ENSG00000257433	Distal transcriptional regulation
ENDOU	Distal transcriptional regulation
ENSG00000257488	Distal transcriptional regulation
C11orf48	Distal transcriptional regulation
METTL12	Distal transcriptional regulation
SNORA57	Distal transcriptional regulation
THADA	Distal transcriptional regulation
ENSG00000247372	Distal transcriptional regulation
HMGCR	Distal transcriptional regulation
MIR181A2HG	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)