SNP Report
Basic Infomation
| Name | rs72819595 dbSNP |
|---|---|
| Location | chr:10,82253134 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 25)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1007521 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs17617713 | 0.85[AMR][1000 genomes] |
| rs17618331 | 0.85[AMR][1000 genomes] |
| rs17680710 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7070261 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs72805703 | 0.92[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs72805704 | 0.92[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs72805707 | 0.84[AMR][1000 genomes] |
| rs72805708 | 0.84[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs72805710 | 0.84[AMR][1000 genomes] |
| rs72805711 | 0.84[AMR][1000 genomes] |
| rs72805716 | 0.84[AMR][1000 genomes] |
| rs72819576 | 0.92[AMR][1000 genomes];0.82[EUR][1000 genomes] |
| rs72819577 | 0.92[AMR][1000 genomes];0.82[EUR][1000 genomes] |
| rs72819578 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs72819579 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs72819580 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs72819581 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs72819584 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs72819585 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs72819591 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72819601 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72819602 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72821609 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72824340 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| TSPAN14 | Distal transcriptional regulation |
| TSPAN14 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014