SNP Report

Basic Infomation

Name	rs17680710 dbSNP
Location	chr:10,82245239
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 27)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1007521	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1047951	1.00[YRI][hapmap]
rs17617713	1.00[GIH][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs17618331	1.00[GIH][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs2068202	1.00[CEU][hapmap]
rs7070261	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72805703	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72805704	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72805707	0.84[AMR][1000 genomes]
rs72805708	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72805710	0.84[AMR][1000 genomes]
rs72805711	0.84[AMR][1000 genomes]
rs72805716	0.84[AMR][1000 genomes]
rs72819576	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72819577	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72819578	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72819579	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72819580	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72819581	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72819584	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72819585	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72819591	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72819595	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72819601	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72819602	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72821609	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72824340	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
TSPAN14	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)