SNP Report

Basic Infomation

Name	rs71477600 dbSNP
Location	chr:11,61261006
Allele	CGAGACTTTCAGAACAG/AGAGACTTACAGAACAGAC

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11230714	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11230715	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11230717	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11230719	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11230724	0.85[AMR][1000 genomes]
rs11230725	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs11230726	1.00[EUR][1000 genomes]
rs11230727	1.00[EUR][1000 genomes]
rs11605791	0.80[AMR][1000 genomes]
rs11607904	0.80[AMR][1000 genomes]
rs12786837	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12786964	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12789378	0.97[AMR][1000 genomes]
rs12795113	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12798315	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12798857	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12800537	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12802349	0.97[AMR][1000 genomes]
rs12806401	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12806665	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1807217	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34710222	0.94[AMR][1000 genomes]
rs35020107	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35033583	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35210023	1.00[AMR][1000 genomes]
rs56788999	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57970255	1.00[EUR][1000 genomes]
rs60685164	1.00[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
PPP1R32	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)