SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11231050	0.84[EUR][1000 genomes]
rs11231061	0.89[EUR][1000 genomes]
rs12279819	0.89[EUR][1000 genomes]
rs12292586	0.92[EUR][1000 genomes]
rs17157227	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs28678254	0.92[EUR][1000 genomes]
rs6863	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7104149	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7112238	0.89[EUR][1000 genomes]
rs72923207	0.89[AFR][1000 genomes]
rs72923263	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72923272	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7941556	0.89[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000255126	Proximal transcriptional regulation
EEF1G	Distal transcriptional regulation
WDR74	Distal transcriptional regulation
C11orf48	Distal transcriptional regulation
C11orf83	Distal transcriptional regulation
BSCL2	Distal transcriptional regulation
ENSG00000255432	Distal transcriptional regulation
METTL12	Distal transcriptional regulation
SNORA57	Distal transcriptional regulation
ASRGL1	Distal transcriptional regulation
B3GAT3	Distal transcriptional regulation
AHNAK	Distal transcriptional regulation
ENSG00000257058	Distal transcriptional regulation
UBXN1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)